BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013C04SP1|AL426490
(855 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig430 1686 0.0
>3x_Contig430
Length = 1969
Score = 1686 bits (849), Expect = 0.0
Identities = 853/855 (99%)
Strand = Plus / Minus
Query: 1 atgttctctgatcaagacatggaatgtatcactatttggaacccatcccaaaagaccgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1575 atgttctctgatcaagacatggaatgtatcactatttggaacccatcccaaaagaccgga 1516
Query: 61 tttaggtgataatgggatagcagggtattgttgaatgttcaaatgcctttggaaactctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1515 tttaggtgataatgggatagcagggtattgttgaatgttcaaatgcctttggaaactctc 1456
Query: 121 ggggttattctgtaataaagtattaaccaaaccaaacaattgcatgaccaaattatcttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1455 ggggttattctgtaataaagtattaaccaaaccaaacaattgcatgaccaaattatcttg 1396
Query: 181 tctgatatcttcatggcccttgacaatatattgatagtctttaccatcgctacccttgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1395 tctgatatcttcatggcccttgacaatatattgatagtctttaccatcgctacccttgat 1336
Query: 241 agatagcctacgaggacgctgtttggatgaaataacagtaaatattggctcgaaatgggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1335 agatagcctacgaggacgctgtttggatgaaataacagtaaatattggctcgaaatgggt 1276
Query: 301 aattctaatgacaggttttccggcatgatatgtacctggaacagcaagttctaaatcttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1275 aattctaatgacaggttttccggcatgatatgtacctggaacagcaagttctaaatcttt 1216
Query: 361 cgcagcagctagttttggtgaaacatgttggagatccaacgtctgtyattgagggagttt 420
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1215 cgcagcagctagttttggtgaaacatgttggagatccaacgtctgtaattgagggagttt 1156
Query: 421 cctgctaatacgacggaagacattataatagatatcccaagcttggttaaggttgttgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1155 cctgctaatacgacggaagacattataatagatatcccaagcttggttaaggttgttgat 1096
Query: 481 atcttttgttctcttgtagttcattacccactcgtgggcatcgttcaaatccctaccaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1095 atcttttgttctcttgtagttcattacccactcgtgggcatcgttcaaatccctaccaaa 1036
Query: 541 cgaattttggaacgaaatctcacgcaaggtttcaggaccacgttttagcatctcatgcaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1035 cgaattttggaacgaaatctcacgcaaggtttcaggaccacgttttagcatctcatgcaa 976
Query: 601 tggctccaaagtggcaaacatcttttccgtgttatgttcaccaaagaattgtctactagc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 975 tggctccaaagtggcaaacatcttttccgtgttatgttcaccaaagaattgtctactagc 916
Query: 661 atcttcaagaccttcgtaccaaagttcgtgccamaaaacagcgactctgatcaattcgtc 720
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 915 atcttcaagaccttcgtaccaaagttcgtgccacaaaacagcgactctgatcaattcgtc 856
Query: 721 acttactaattctgcttgatcgacaagtttaggactgtgcattctcatcttatctatgat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 acttactaattctgcttgatcgacaagtttaggactgtgcattctcatcttatctatgat 796
Query: 781 ggacaaagctgccctctgtcttgagaccgaatcagatttaatggcaactgtcaatggata 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 ggacaaagctgccctctgtcttgagaccgaatcagatttaatggcaactgtcaatggata 736
Query: 841 cactaatgcctgtgg 855
|||||||||||||||
Sbjct: 735 cactaatgcctgtgg 721
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5574
Number of Sequences: 1807
Number of extensions: 5574
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 855
length of database: 10,358,551
effective HSP length: 16
effective length of query: 839
effective length of database: 10,329,639
effective search space: 8666567121
effective search space used: 8666567121
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)